Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BQ.1.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-21584South Korea
BF.7.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DN.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.28NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CJ.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBF.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.31NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FD.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.25.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.13.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBC.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GC.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.40NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.32NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.65NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCVNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.31.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.50NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.78NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.43NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HR.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HS.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HH.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HU.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.54NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DR.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.26NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.5.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.59NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.160NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JV.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCYNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used