Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BQ.1.1.40NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DM.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.8.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.32NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GD.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBZNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BR.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.79NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.42NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
K.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.56NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.41NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KF.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
BA.4.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
ANWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.48.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.38NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DT.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DS.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.63NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DU.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.53NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.4.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.47NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.58NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GH.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.2.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.96NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EZ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BU.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EW.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BW.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FB.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used