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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BB.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.86 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.4.7 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.4.12 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.7.2 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.1.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.390NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
N.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.319NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BG.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JF.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.572NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.397NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Q.3 (Alpha)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.523NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.116 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.38 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.595.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.340NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GN.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.1.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.413NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.5.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JD.1.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.268NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.409NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FG.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KV.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.1.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.11.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EE.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.4.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BY.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.26NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.69NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.98NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.71NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HT.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.90NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FB.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.18.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.26NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.60NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used