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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
DF.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.35NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.52NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.65NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.75NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.21NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.18.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.24NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GL.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.24NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.78NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.4.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.17NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CR.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.2.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EH.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.3.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DF.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CK.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.25NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.42NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.69NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.70NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.5.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.31NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.41NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.46NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CP.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.25NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
GG.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.3.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CK.1.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.34NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used