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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AM.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AA.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.249NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AA.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.505NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.74NWon-NGTTGCGACTACGTGATGAGG20552884928830R-1923.32South Korea
B.1.406NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.115NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.29NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AA.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.133NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.466NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.489NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.363NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.95NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.26NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.531NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.45NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.200NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.35NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CY.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FR.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBJ.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CP.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GJ.1.2.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CK.1.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.56.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.21NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.13.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.37NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DV.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.26NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DV.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FJ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DV.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.80NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CV.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBKNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.14.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBK.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EF.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used