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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.91NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.227NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.555NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.513NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.31NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HN.4.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XACNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.1.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XZNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.36.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
AN.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.28NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.221.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.242NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.160.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.449NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.152NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.146NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
D.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.81NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.64NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AH.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.327NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.396NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.129NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AK.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.20NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.221.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.224NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.4.6.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBJNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EJ.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
DQ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.31.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.77NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XAY.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BY.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DK.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.11.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.63NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FM.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.4.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.1.10.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-21359South Korea
EG.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GN.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.13.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GW.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used