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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AY.98 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.32NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.1.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDTNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.21NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.2.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.617.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.109 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.4.2.2 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.4.2.3 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.4.8 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.617.1 (Kappa)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.4.3 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDFNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.575.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.620NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.2.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDMNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.30NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LV.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GE.1.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.2.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JC.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KE.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.8.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.30NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.56NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JD.1.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.64NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.8 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.7 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.41NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.90 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.30NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.1.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.87NWon-NGTTGCGACTACGTGATGAGG20552884928830R-17354.8South Korea
BA.5.2.33NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
P.1.14 (Gamma)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
P.1.7.1 (Gamma)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
P.1.2 (Gamma)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.112 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
P.1.10 (Gamma)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.2.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used