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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
DB.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CZ.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.29NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.4.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.47NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FK.1.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBC.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.26.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DS.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DV.6.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.11.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.4.1.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CQ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-21584South Korea
BA.5.2.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.4.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.17NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CC.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BZ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CK.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.50NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.60NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.52NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
W.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.250NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.63NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.130NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.44NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.315NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.204NWon-NGTTGCGACTACGTGATGAGG20552884928830R-21309.6South Korea
B.1.177.50NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.170NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.232NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.84NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.76NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.301NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.269NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.5.4 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.323NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used