Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AY.103 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.3 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.18.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.396NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.595.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.311NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.369NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.367NWon-NGTTGCGACTACGTGATGAGG20552884928830R-18062.4South Korea
B.1.595NWon-NGTTGCGACTACGTGATGAGG20552884928830R-21584South Korea
B.1.240NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.192NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.39.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
ME.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LE.1.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDR.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.49.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HV.1.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.15.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
GK.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JD.1.1.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.39NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.3.20NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.33 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.14.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.14.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1 (Omicron)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.17.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.99.2 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.54NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.120 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.4.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDK.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LL.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.22NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.3.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCUNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.27.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.57NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.35NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FU.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used