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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XBB.2.3.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.4.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.25NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.2.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.26NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GJ.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DY.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.14.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.3.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DY.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HH.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EM.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FD.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GF.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.24NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FU.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.4.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GY.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.22NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HL.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.42.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DZ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DZ.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.14.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DY.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.14.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.14.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KS.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
MM.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.48.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.4.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
MC.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LB.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LP.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.50.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
MH.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LB.1.3.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.43NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.21NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JC.5.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used