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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
JN.1.7.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.2.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.100 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.44 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.2.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LD.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KW.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KR.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.15.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.50.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LB.1.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LF.3.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.59NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.24.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.17.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.63NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.2.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GW.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.2.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.14.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.13.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-18648.1South Korea
GS.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GE.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.93NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.2.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.4.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.1.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GM.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.13.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GV.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.3.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DY.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.48NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.49NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.14.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.4.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GY.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.2.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-18648.1South Korea
XBB.1.5.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EU.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used