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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.1.169NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.43NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.42NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AE.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
D.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.447NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.110.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.180NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.155NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.92NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.145NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.120NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.77NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AE.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.504NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XAYNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DJ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XAENWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.467NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.484NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.476NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.19NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.404NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CV.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.38.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
N/ANWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.258.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-941.915South Korea
B.1.370NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.118NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.137NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.309NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.632NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.72NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.108NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.332NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.42.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.46NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.3.21NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.530NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.17.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.75.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.570NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.633NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DD.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.136NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DJ.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.73NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used