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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.1.375NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BL.1.4NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BA.2.75.9NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBHNCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BL.1.2NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BQ.1.1.78NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.9.4NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BQ.1.1.64NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBC.1.2NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.221.2NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
DP.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BL.1.5NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BN.2NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.177.62NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BA.2.82NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.1.20NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BA.2.3.22NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BA.2.38.2NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
GS.8NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
GE.1.4NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.1.5.93NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FL.2.3.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FL.4.8NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
EG.5.1.18NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
HK.4NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
GM.3NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FL.13.2NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
GV.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
HH.4NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
EM.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FD.2NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
GF.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
EG.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.1.5.24NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FL.2NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FU.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FL.4.6NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
GY.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FL.3NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.1.16.18NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.2.3.2NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FL.2.3NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.1.5.15NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.2.3.6NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
EG.2NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
EU.1.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.2.3.7NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FL.4.11NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BF.7.14NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
EG.5NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used