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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XAY.2.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.7.10SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CM.8.1.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.7.5.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BE.1.2.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.165SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.258.12SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
V.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.149SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.413SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.258.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.9.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.107SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.10SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.9SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.4.10 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-10601.4South Korea
BA.2.62SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.80 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.43.8 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.128 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
A.21SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.220SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.58SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.258.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.438SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.257SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Z.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
V.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.36.22SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.282SWon-SCTACATGCACCAGCAACTGT20502311423133F-19106.5South Korea
B.1.131SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.274SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
A.25SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.235SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.65SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.45SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.1.50SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.60SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.52SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
W.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.250SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.63SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.27SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.23SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.130SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.44SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.469SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.315SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.204SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used