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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AY.127.1 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.88SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
AP.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AK.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
AY.98.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.1.13.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HK.34.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.124.1.1 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.203SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FY.8.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17683South Korea
XBNSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBJ.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.356SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.462SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
A.29SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.147SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
P.1.6 (Gamma)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
P.1.5 (Gamma)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
P.1.4 (Gamma)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.420SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.168SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.36.39SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.57SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AH.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.289SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.365SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.252SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.223SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.640.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.11 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.38.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XAVSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BE.1.4.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBC.1.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BM.4.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.20SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.77SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CP.1.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FC.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BY.1.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.7.17SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.97SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.36.18SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.32SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.1.59SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.177.67SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.277SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.28 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.272SWon-SCTACATGCACCAGCAACTGT20502311423133F-18242.2South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used