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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.1.135SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FK.1.4.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.13SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DR.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.516SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.354SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.162SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.426SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.402SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.424SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.61SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.264SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.581SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.330SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.205SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FW.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CH.1.1.29SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.55SWon-SCTACATGCACCAGCAACTGT20502311423133F-15985.6South Korea
B.1.14SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.35SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
A.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.422SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.56SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.4.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.507SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.178SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.273SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.211SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.474SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.160.14SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.297SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AH.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.280SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.597SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.45SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
BA.2.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.443SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.595.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.495SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.294SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.453SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.44SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.350SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.304SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.315SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.12SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BM.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.2.28SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used