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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
A.28SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.567SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.23SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.541SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.24SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.25SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.189SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.563SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.34SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.258SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.23.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.21.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.28SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.42SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.4.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.51SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.1.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KU.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KZ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.36SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JQ.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KT.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LA.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.4.2.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LK.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDSSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LY.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDQ.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.18SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GJ.1.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.3.2.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GW.5.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GW.5.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.53.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDQ.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HV.1.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KA.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HV.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.35SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used