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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
EG.6.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
P.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
P.2 (Zeta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.33SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
N.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.499SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
N.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.212SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.61SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.20.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.5.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.13.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JY.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XCRSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.86SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GJ.1.2.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GE.1.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HN.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.29SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.1.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.35.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GE.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HE.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.33SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.4.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.99SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HW.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.4.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FE.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HA.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GM.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.1.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.28SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.20.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.110SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.86.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GN.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.8.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HB.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.10.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.89SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.13.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BN.1.3.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XCF.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XCCSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FK.1.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used