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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BG.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.4.1.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.576SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.325SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.22SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.521SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.378SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.206SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.636SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.126SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.47SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDQ.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JD.1.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBC.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.31.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CK.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.8.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CA.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.61SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
ED.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BU.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BN.1.3.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XCGSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.1.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JE.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JD.1.1.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XCKSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GN.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GY.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HH.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.25SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.1.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDCSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.15.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JR.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-8697.18South Korea
JD.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JG.3.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KE.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HV.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.86.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used