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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.36.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.520SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.38SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.521SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.383SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.304SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.214.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.577SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.639SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.2.5.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AZ.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.270SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.227SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
U.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.28SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.258.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.50 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.266SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.253SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.305SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AA.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.241SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.33SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.326SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.558SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.518SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.368SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.404SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.306SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.328SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-2575.96South Korea
B.1.533SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.525SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.480SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.214SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.117SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.157SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.187SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.160.30SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.213SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.341SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.89SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.23SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.30SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.379SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.240SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.240.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.121.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used