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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
CM.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.25SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.42SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.1.1.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.1.1.26SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DV.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.1.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.1.1.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FJ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BN.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DV.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.80SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CV.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBKSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.14.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBK.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EF.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DF.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.35SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.52SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.1.1.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.65SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.75SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.21SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.18.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.24SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GL.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.24SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.78SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.4.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BE.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CR.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.2.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DV.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BG.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JF.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.572SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.397SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used