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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BA.2.10.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.56SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.29SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.51SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.18SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XATSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.24SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.18SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.5.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BN.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BN.1.3.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.25SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.4.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BN.1.3.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BL.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.47SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
ED.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BE.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.24SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.16SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.26SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.22SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.21SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.22SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.38SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.11.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.63SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FM.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GA.4.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.1.10.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GN.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.13.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GW.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.424SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AF.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.89SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
M.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.333SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.429SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.463SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
U.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.373SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.80SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.433SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used