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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AY.39.3 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.8.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.75.3 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.347SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.195SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.321SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.379SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.78SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.16SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.231SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.49SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.67SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.190SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CK.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBC.1.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.11.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDLSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.29.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.29.2 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BC.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
BA.2.10.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.299SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-20316.5South Korea
B.1.1.55SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.149SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.300SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.179SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.25SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.125SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
G.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.438SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.35SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EN.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.30 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.85 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.6.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.21SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FK.1.3.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBFSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.11.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBF.7.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-1215.87South Korea
B.1.1.367SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.1.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BN.1.3.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.385SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.45SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used