Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
EG.1.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XAY.2.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.1.1.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.36SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BV.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.26SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BE.4.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GM.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.20SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.26SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.129 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XAY.2.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18758.6South Korea
BF.7.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.8.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.5.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BE.1.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.165SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.258.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
V.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.149SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.413SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.258.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.9.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.107SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.4.10 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.62SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.80 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.43.8 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.128 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.21SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.220SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.58SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.258.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.438SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.257SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Z.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
V.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.22SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.282SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.131SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.274SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.25SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.235SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.65SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.45SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.50SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used