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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
JN.1.16.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LW.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LP.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LB.1.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.3.3.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
ML.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.3.1.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.3.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.3.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LB.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
MM.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.48.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.4.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
MC.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LB.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LP.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.50.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
MH.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LB.1.3.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.21SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JC.5.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDPSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.3.3.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.2.3.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.3.2.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LU.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LF.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LB.1.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.28.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GA.6.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.61SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FR.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.2.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.25SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.33SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.29SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GP.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.7.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.1.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.2.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.2.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LB.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.3.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
XDYSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.18.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used