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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
JN.1.24.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.18.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LU.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.40SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
MG.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HH.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EM.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FD.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GF.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.24SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FU.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18758.6South Korea
FL.4.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GY.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.22SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HL.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.42.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DZ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DZ.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.14.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DY.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.14.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.14.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.25SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BN.1.2.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.26SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GJ.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DY.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.14.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.3.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DY.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.59SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.24.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.17.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.63SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.2.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GW.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.2.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.14.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.13.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.18SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.16SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GS.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GE.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.93SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used