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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.180SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.155SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.92SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.145SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.120SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.77SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AE.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.504SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.407SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.20SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.423SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.281SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AE.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.230SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.535SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.24SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.564.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.46SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.139SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.508SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.94SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.463SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.357SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.318SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.557SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.119SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.160SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
D.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.134SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.393SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.381SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.32SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AE.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.516SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.526SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.279SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AE.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
N.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.36SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AE.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.201SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.221SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.410SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.411SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.109SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.361SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.38SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.417SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used