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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.112SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.274SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.515SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.450SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.130SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.444SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AW.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.268SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.344SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.103SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.485SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.119SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.276SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.111SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
L.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.310SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.185SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.258.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.329SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.229SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.342SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.90SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.169SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.53SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.513SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.338SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.284SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.9.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.498SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.184SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.187SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
D.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AE.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.110.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.342SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.214SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.284SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.351.3 (Beta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.318SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
R.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.29 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
ML.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.283SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BE.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.96SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.547SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.247SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.4.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.205SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used