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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
A.2.5.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.118SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.501SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.226SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.546SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.194SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.429.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
P.1.9 (Gamma)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.25.1.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.203SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.157SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.515SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.287SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.431SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.170SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.23SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.506SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.6.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.438.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.30SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.336SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.400.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.537SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.548SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.24.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.492SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.540SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.487SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.258.20SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.37SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.319SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.182SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.430SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.331SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.112.3 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.37SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
N.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.176SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.3.4 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.391SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.393SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.432SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.388SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
P.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.48SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used