Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BQ.1.1.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.33SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.29SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.28SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CL.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HH.8.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FM.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FK.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.7.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.8.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EU.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.21SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EJ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BM.1.1.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XAYSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DJ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XAESWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.467SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.484SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.476SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.18SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.404SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CV.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DJ.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.38.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
N/ASWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.258.23SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.370SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.118SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.137SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.309SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.632SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.72SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.108SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.332SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.42.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.21SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.530SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.1.17.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
BA.2.75.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.570SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.633SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DD.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.136SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.73SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used