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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
GK.1.10.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
EG.10NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
GN.1.3NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FL.13.3.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
GW.3NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.424NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.198NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.366NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.441NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.416NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.63NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.263NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.135NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FK.1.4.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.13NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
DR.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.516NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.354NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.162NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.426NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.402NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.424NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.61NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.264NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.581NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.330NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.205NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.177NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.301NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.308NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.210NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.325NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.590NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.116NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.496NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.438.4NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AY.49 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.507NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.178NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.273NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.211NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.474NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.160.14NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.297NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AH.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.280NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.597NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.2.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.443NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.595.4NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used