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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
EA.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XJNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BR.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBF.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.1.29NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DA.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.68 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.1.14NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.1.16.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DN.1.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.160.28NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.5.2 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DN.1.1.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.1.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.84 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.99NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.3.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XAY.1.1.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.19NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GY.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBF.10NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GA.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XAY.1.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.38NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CT.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.10.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CM.5.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CM.8.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBSNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BN.1.2.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XAHNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.2.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBJ.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EP.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.4.1.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CL.1.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBF.8.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XAUNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XAY.1.1.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.25.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XADNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XABNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CH.1.1.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FT.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XALNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBWNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.1.15.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.15NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.59 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used