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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
EG.5.1.9NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XCHNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JF.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GK.1.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JE.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JD.1.1.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XCKNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GN.1.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.16.27NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GY.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HH.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.25NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.5.1.11NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.9NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.14NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XDCNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.15.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JR.1.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JD.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JG.3.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
KE.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HV.1.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.86.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HH.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.22.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-21208.1South Korea
GY.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HW.1.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FY.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.38NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.16.12NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.46NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GB.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.72NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.86NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.41.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GS.4.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JF.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.5.1.13NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JG.3.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.16.28NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBBNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.1.13NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.16.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.2.3.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.24NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.2.3.20NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.5.2.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.27NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.30NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used