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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.284SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.9.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.9.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.498SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.498SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.184SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.184SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.499.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.499.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.38SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.38SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.116SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.116SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.134SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.134SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.393SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.393SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.381SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.381SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.32SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
C.32SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AE.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AE.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.516SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.516SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.526SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.526SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.279SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.279SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.511SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.511SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.428.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17259.9South Korea
B.1.428.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.506SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.506SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.482SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.482SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.335SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.335SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.36SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.36.36SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.145SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.145SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.547SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.547SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.247SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.247SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.4.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.4.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.205SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used