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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.310SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.185SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.7.19.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.7.19.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.43SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.43SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.12SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.2.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.23SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.7.23SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.214SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.214SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.284SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.284SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.351.3 (Beta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.351.3 (Beta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.318SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.318SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
R.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
R.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.29 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
AY.29 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
ML.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
ML.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.169SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.169SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.53SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.53SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.4.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.4.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.528SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.528SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.175SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.175SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.6.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.6.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.483SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.483SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.181SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.181SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.113SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.113SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.594SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.594SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.328SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.328SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.13SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used