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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AY.46.6.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.112.1 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.112.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.360SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.360SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.49SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.49SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.347SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.347SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.195SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.195SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.321SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.321SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.505SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.505SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.74SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.1.74SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.406SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.406SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.115SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.115SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.29SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.29SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AA.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AA.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.133SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.133SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.18SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.18SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.466SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.466SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.489SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.489SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.363SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.363SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.190SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.190SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.120SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.120SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AM.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AM.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AA.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AA.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.249SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.249SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AA.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AA.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XASWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XASWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18758.6South Korea
AZ.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used