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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BA.2.3.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.3.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.85SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.85SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.65SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.65SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BG.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BG.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.10.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.10.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.13SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.3.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.9SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.3.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.10.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.10.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.56SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.56SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.29SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.29SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.10SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.51SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.51SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.18SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.3.18SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XATSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XATSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.24SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.24SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BM.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BM.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.28SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.2.28SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.62SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.2.62SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.24SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.2.24SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.13.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.13.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.28SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.28SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used