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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.1.358SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.28SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
C.28SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.60SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.60SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.159SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.159SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.39SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.39SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.141SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.141SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.591SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.591SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.468SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.468SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.131 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.131 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.586SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.586SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.424SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.424SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.61SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.61SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.264SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.264SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.581SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.581SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.330SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.330SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.205SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.205SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.495SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.495SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.294SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.294SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.453SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.453SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.44SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.44SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.350SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.350SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.304SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.304SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.315SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.315SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.516SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.516SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.354SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.354SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.162SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used