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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AY.15 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.113SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.113SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GA.10SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GA.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.5.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.5.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.423SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.423SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.550SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.550SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.261SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.261SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.3.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.3.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EP.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EP.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.320SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.320SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.33SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
C.33SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.635SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.635SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.21SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
C.21SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.14SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
C.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.258.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.258.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.215SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.215SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.20SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.36.20SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.82SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.82SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.462SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.462SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.218SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.218SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.21SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.21SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BN.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BN.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BN.1.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BN.1.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AD.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AD.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.26.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used