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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XBB.1.5.22SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EN.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EN.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.14SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
XBB.2.3.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.13SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DV.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DV.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FD.2.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FD.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FP.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FP.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FD.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FD.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FG.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FG.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.19SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.56SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.56SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.59SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.59SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GA.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GA.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.67SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.67SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.2.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.2.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GB.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-20112South Korea
GB.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.2.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FY.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.13SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.11SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.4.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.4.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.84SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.84SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EU.1.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
EU.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.97SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.97SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.1.1.14SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used