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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.1.241SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.33SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.33SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.326SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.326SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.255SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.255SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.303SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.303SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AA.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AA.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.173SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.173SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-14485.7South Korea
B.1.1.12SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.341SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.341SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.89SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.89SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.23SWon-SCTACATGCACCAGCAACTGT20502311423133F-17259.9South Korea
B.1.36.23SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.30SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.30SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.315SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.315SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.204SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.204SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.50SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.50SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.170SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.170SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.232SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.232SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.84SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.84SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.383SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.383SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.117SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.117SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.157SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.157SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.187SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.187SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.160.30SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.160.30SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.213SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.213SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.549SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.549SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.160.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used