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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AY.129 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XAY.2.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XAY.2.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18758.6South Korea
BF.7.10SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.7.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.8.1.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CM.8.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.5.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.7.5.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BZ.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BZ.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.10.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.10.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.24SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.7.24SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.10SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.44SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.44SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BE.1.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BE.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EA.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EA.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.22SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.22SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DH.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DH.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XGSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XGSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.3.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.3.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.2.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BE.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BE.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.9SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.11.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.11.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBF.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBF.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.4.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.4.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.54SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used