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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BQ.1.1.65SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.2.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CV.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CV.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBKSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBKSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.14.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.14.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBK.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBK.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EF.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EF.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CM.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DF.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DF.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.35SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.35SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EH.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EH.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.3.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.3.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.63SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.63SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DU.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DU.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.53SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.53SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.4.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
BF.7.4.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.15SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.2.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.2.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GD.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GD.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBZSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBZSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BR.2.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BR.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used