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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XBB.1.5.62SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GW.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GW.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.1.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FY.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.2.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EG.5.2.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.27SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HK.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.30SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HK.30SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HK.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.1.17SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EG.5.1.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DV.6.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DV.6.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
XBB.2.3.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FE.1.1.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FE.1.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FY.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.1.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EG.1.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.1.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.30SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.16.30SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HH.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
HH.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.29SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HK.29SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.3.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FY.3.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
XBB.2.3.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.24SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.24SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.20SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
XBB.2.3.20SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.9.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.9.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FY.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDBSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used