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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
FL.21.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.1.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EG.5.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EG.5.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.28SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HK.28SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.9SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.1.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EG.1.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.49SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.49SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBL.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBL.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FR.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FR.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.17SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
XBB.2.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.18.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.18.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.15SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.14SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EG.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.14SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.12SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
XBB.2.3.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.568SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.568SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
P.1.13 (Gamma)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
P.1.13 (Gamma)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.372SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.372SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.634SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.634SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.37.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
C.37.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.630SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.630SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.360SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.360SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.578SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.578SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.544SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.544SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.448SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used