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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.619SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.36.3.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
C.36.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.36.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
C.36.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.23.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
A.23.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.316SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.316SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.216SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.216SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.471SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.471SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.16SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
C.16SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.420SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.420SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
L.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
L.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.36SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.39SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.39SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.561SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.561SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.605SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.605SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.29SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.36.29SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.596SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.596SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
W.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
W.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.507SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.507SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.54SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.54SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.196SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.196SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.57SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.57SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.34SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.34SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JB.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
JB.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
A.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDK.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used