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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
C.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.91 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
AY.91 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.585SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.585SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.351SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.351SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.36.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.36.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.243SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.243SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
R.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
R.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-20316.5South Korea
B.1.565SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.565SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.361SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.361SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.101SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.101SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.478SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.478SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.86SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.86SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.543SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.543SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.139SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.139SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.31SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
C.31SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.221SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.221SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.362SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.362SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.265SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.265SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.518SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.518SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.551SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.551SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.17SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
C.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.207SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.207SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.604SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.604SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.111SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.111SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.619SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used