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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
P.1.9 (Gamma)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.25.1.1 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.25.1.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.203NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.203NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.388NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.388NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
P.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
P.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.48NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.48NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.112NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.112NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.274NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.274NWon-NGTTGCGACTACGTGATGAGG20552884928830R-941.915South Korea
B.1.428.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.428.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-14910.4South Korea
AJ.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AJ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-1923.32South Korea
B.1.459NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.459NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.160.29NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.160.29NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.415.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.415.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.243.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.243.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.157NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.157NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.176NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.176NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.3.4 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.3.4 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.391NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.391NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.393NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.393NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.432NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.432NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.632NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.632NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.72NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.72NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.108NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.108NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.332NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.332NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.42.1 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.42.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.348NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used