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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AE.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.201NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.201NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.221NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.221NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.182NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.182NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.430NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.430NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.331NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.331NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.19NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-14127.1South Korea
B.19NWon-NGTTGCGACTACGTGATGAGG20552884928830R-1923.32South Korea
AY.112.3 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.112.3 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.37NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.37NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.110.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.110.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.180NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.180NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.155NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.155NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.92NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.92NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.145NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.145NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.120NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.120NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.12NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
A.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.417NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.417NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AM.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AM.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.258.20NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.258.20NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.37NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.36.37NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.319NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.319NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.46NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.139NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.139NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.508NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.508NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.94NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.94NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.463NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.463NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used