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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BA.2.76.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.38.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.38.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.38.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.38.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BM.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BM.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.357NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.357NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
N.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
N.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.515NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.515NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.287NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.287NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.431NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.431NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.12NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
C.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.170NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.170NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.410NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.410NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.411NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.411NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.109NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.109NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.361NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.361NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.38NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.177.38NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.318NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.318NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.557NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.557NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.119NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.119NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.160NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.160NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
D.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
D.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.447NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.447NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.77NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.77NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AE.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AE.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.504NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.504NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AE.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used